##! Calculate the variance. @load ./average @load ../main module SumStats; export { redef enum Calculation += { ## Calculate the variance of the values. VARIANCE }; redef record ResultVal += { ## For numeric data, this is the variance. variance: double &optional; }; } redef record ResultVal += { # Internal use only. Used for incrementally calculating variance. prev_avg: double &optional; # Internal use only. For calculating incremental variance. var_s: double &default=0.0; }; function calc_variance(rv: ResultVal) { rv$variance = (rv$num > 1) ? rv$var_s/(rv$num-1) : 0.0; } hook register_observe_plugins() &priority=-5 { register_observe_plugin(VARIANCE, function(r: Reducer, val: double, obs: Observation, rv: ResultVal) { if ( rv$num > 1 ) rv$var_s += ((val - rv$prev_avg) * (val - rv$average)); calc_variance(rv); rv$prev_avg = rv$average; }); add_observe_plugin_dependency(VARIANCE, AVERAGE); } # Reduced priority since this depends on the average hook compose_resultvals_hook(result: ResultVal, rv1: ResultVal, rv2: ResultVal) &priority=-5 { if ( rv1?$var_s && rv1?$average && rv2?$var_s && rv2?$average ) { local rv1_avg_sq = (rv1$average - result$average); rv1_avg_sq = rv1_avg_sq*rv1_avg_sq; local rv2_avg_sq = (rv2$average - result$average); rv2_avg_sq = rv2_avg_sq*rv2_avg_sq; result$var_s = rv1$num*(rv1$var_s/rv1$num + rv1_avg_sq) + rv2$num*(rv2$var_s/rv2$num + rv2_avg_sq); } else if ( rv1?$var_s ) result$var_s = rv1$var_s; else if ( rv2?$var_s ) result$var_s = rv2$var_s; if ( rv1?$prev_avg && rv2?$prev_avg ) result$prev_avg = ((rv1$prev_avg*rv1$num) + (rv2$prev_avg*rv2$num))/(rv1$num+rv2$num); else if ( rv1?$prev_avg ) result$prev_avg = rv1$prev_avg; else if ( rv2?$prev_avg ) result$prev_avg = rv2$prev_avg; calc_variance(result); }